scRNA-seq

hPGCdb provides an integration of germline lineage cells from multiple studies. This merged germline lineage includes hESCs, hiPSCs, iMeLCs, day1-4hPGCLCs, week7-16 female ovaries, week17-18 male testis.

HOW TO USE

1. scRNA-seq cell cluster

select input

1. Choose one sample you are interested in.

2. Choose the cluster you want (The default is UMAP).

3. Choose the dimensionality you want (The default is 2D).

4. Submit your choice.

get the result

After a period of loading, interesting scRNA-seq cell cluster results are obtained. You can interact with and download the results.

2. scRNA-seq gene expression

select input

1. Choose one sample you are interested in.

2. Choose the gene you want (The default is DDX11L1).

3. Choose the cluster you want (The default is UMAP).

4. Submit your choice.

get the result

After a period of loading, interesting scRNA-seq cell cluster results are obtained. You can interact with and download the results.

3. scRNA-seq germline lineage pseudotime curve

select input

1. Choose one sample you are interested in.

2. Choose the gene you want.

4. Submit your choice.

get the result

After a period of loading, interesting scRNA-seq cell cluster results are obtained. You can interact with and download the results.